Gerry Higgins, PhD
Adjunct Research Professor
Computational Medicine and Bioinformatics
[email protected]

Available to mentor
Gerry Higgins, PhD
Adjunct Research Professor
  • Center Memberships
  • Recent Publications
    • Center Memberships
    • Center Member
      Center for Integrative Research in Critical Care
    Recent Publications See All Publications
    • Journal Article
      A new framework for host-pathogen interaction research.
      Yu H, Li L, Huffman A, Beverley J, Hur J, Merrell E, Huang H-H, Wang Y, Liu Y, Ong E, Cheng L, Zeng T, Zhang J, Li P, Liu Z, Wang Z, Zhang X, Ye X, Handelman SK, Sexton J, Eaton K, Higgins G, Omenn GS, Athey B, Smith B, Chen L, He Y. Front Immunol, 2022 13: 1066733 DOI:10.3389/fimmu.2022.1066733
      PMID: 36591248
    • Journal Article
      Resident Perceptions and Evaluations of Fellow-Led and Resident-Led Surgical Services.
      Williams AM, Bhatti UF, Barrett M, Nikolian VC, Han B, Matusko N, Sung RS, Reddy RM, Newman EA, Woodside KJ, Sandhu G, Wilson MC, Branks PL, Higgins GA. American Journal of Surgery, 2019 Jan 1; 217 (2): 373 - 381.
    • Proceeding / Abstract / Poster
      3D cell nuclear morphology: Microscopy imaging dataset and voxel-based morphometry classification results
      Kalinin AA, Allyn-Feuer A, Ade A, Fon GV, Meixner W, Dilworth D, De Wet JR, Higgins GA, Zheng G, Creekmore A, Wiley JW, Verdone JE, Veltri RW, Pienta KJ, Coffey DS, Athey BD, Dinov ID. IEEE Computer Society Conference on Computer Vision and Pattern Recognition Workshops, 2018 Dec 13; 2018-June: 2353 - 2361. DOI:10.1109/CVPRW.2018.00304
    • Journal Article
      3D Shape Modeling for Cell Nuclear Morphological Analysis and Classification.
      Kalinin AA, Allyn-Feuer A, Ade A, Fon G-V, Meixner W, Dilworth D, Husain SS, de Wet JR, Higgins GA, Zheng G, Creekmore A, Wiley JW, Verdone JE, Veltri RW, Pienta KJ, Coffey DS, Athey BD, Dinov ID. Sci Rep, 2018 Sep 12; 8 (1): 13658 DOI:10.1038/s41598-018-31924-2
      PMID: 30209281
    • Journal Article
      Publisher Correction: 3D Shape Modeling for Cell Nuclear Morphological Analysis and Classification.
      Kalinin AA, Allyn-Feuer A, Ade A, Fon G-V, Meixner W, Dilworth D, Husain SS, de Wet JR, Higgins GA, Zheng G, Creekmore A, Wiley JW, Verdone JE, Veltri RW, Pienta KJ, Coffey DS, Athey BD, Dinov ID. Sci Rep, 2018 Oct 26; 8 (1): 16142 DOI:10.1038/s41598-018-33574-w
      PMID: 30367081
    • Journal Article
      Rapid valproic acid-induced modulation of the traumatic proteome in a porcine model of traumatic brain injury and hemorrhagic shock.
      Weykamp M, Nikolian VC, Dennahy IS, Higgins GA, Georgoff PE, Remmer H, Ghandour MH, Alam HB. J Surg Res, 2018 Aug; 228: 84 - 92. DOI:10.1016/j.jss.2018.02.046
      PMID: 29907235
    • Journal Article
      Deep learning in pharmacogenomics: from gene regulation to patient stratification.
      Kalinin AA, Higgins GA, Reamaroon N, Soroushmehr S, Allyn-Feuer A, Dinov ID, Najarian K, Athey BD. Pharmacogenomics, 2018 May; 19 (7): 629 - 650. DOI:10.2217/pgs-2018-0008
      PMID: 29697304
    • Journal Article
      The pharmacoepigenomics informatics pipeline defines a pathway of novel and known warfarin pharmacogenomics variants.
      Allyn-Feuer A, Ade A, Luzum JA, Higgins GA, Athey BD. Pharmacogenomics, 2018 Apr; 19 (5): 413 - 434. DOI:10.2217/pgs-2017-0186
      PMID: 29400612